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AT1G78620.1
integral membrane protein (Protein of unknown function DUF92%2C transmembrane)
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| Lab Annot. |
phytol-dikinase (VTE6)
Mapman: 19.50* tetrapyrrole synthesis.tetrapyrrole degradation |
| Curated Location |
envelope-inner-integral (Pubmed: 23198870 12177442 ) (supported by in-house exprements)
TAIR curated location: chloroplast inner membrane0012177442 |
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
DUF92(1) WW_FCH_linker(1) |
| TargetP: |
Chloroplast (Class 2 C0.909; M0.208; S0.003; _0.025) |
| Predotar: |
|
| Subcel. Location: |
Transmembrane |
| TM-HMM prediction: |
3 TMs |
| Aramemnon: |
6 TMs |
| TAT position: |
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| Length |
333 aa (-cTP 268) |
| Molecular Weight |
34.87 kDA(-cTP 28.03) |
| PI |
9.84(-cTP 9.36) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 326 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 342 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast low density membrane | wild-type |
| 873 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 877 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 1349 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 2) |
| 1426 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 3) |
| 1439 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 1) |
| 1440 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 2) |
| 1444 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 3) |
| 1446 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | wild-type (rep. 2) |
| 1447 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | wild-type (rep. 3) |
| 1643 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | Wild-type |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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12766230(Total chloroplast envelope)
18431481(chloroplast)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21515685(GreenCut2)
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Comparative Proteomics Data
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