PPDB

 The Plant Proteome Database

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AT1G78600.1   light-regulated zinc finger protein 1
Lab Annot.
Mapman: 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G78600.2 11Arabidopsis thaliana031993930 (0)S
AT1G06040.2 11Arabidopsis thaliana3E-4410864770 (0)_
AT1G06040.1 11Arabidopsis thaliana7E-4410864770 (0)_
Os06g05890.1 7Oryza sativa1E-6536538500 (0)S
Os01g10580.1 7Oryza sativa1E-5435836500 (0)S
Os05g11510.1 7Oryza sativa1E-4012162730 (0)_
Zm00001eb376730_P001 agpv5Zea mays4E-7337840510 (0)S
GRMZM2G028594_P01 3.21Zea mays4E-7337840510 (0)S
v1_GRMZM2G028594_P01 4a53Zea mays4E-7337840510 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: C1_2(1) CEBP_ZZ(2) DUF2318(2) DUF4428(2) zf-B_box(2)
TargetP: Secreted (Class 4 C0.024; M0.013; S0.619; _0.334)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 299 aa (-cTP 249)
Molecular Weight 32.86 kDA(-cTP )
PI 5.89(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help