PPDB

The Plant Proteome Database

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AT1G78510.1   solanesyl diphosphate synthase 1

Lab Annot. solanesyl diphosphate synthase 1 (SPS1) - specific for PQ9/PC8 synthesis
Mapman: 16.1 secondary metabolism.isoprenoids
Curated Location plastid stroma (Pubmed: 23198870 21950843 23913686 )

TAIR curated location: plastid11069698
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G78510.2 11Arabidopsis thaliana0366949614 (5)M
AT1G17050.1 11Arabidopsis thaliana04187986185 (140)C
AT2G34630.2 11Arabidopsis thaliana3E-6731439620 (0)M
Os12g17320.1 7Oryza sativa0394687916 (16)C
Os05g50550.1 7Oryza sativa0325779013 (13)C
Os06g46450.1 7Oryza sativa2E-7631442648 (8)M
GRMZM2G112728_P05 3.21Zea mays0324788881 (71)C
GRMZM2G112728_P01 3.21Zea mays0324788881 (71)C
v1_GRMZM2G112728_P01 4a53Zea mays0324788868 (68)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HEPPP_synt_1(1) polyprenyl_synt(1) Urm1(1)
TargetP: Chloroplast (Class 5 C0.253; M0.181; S0.083; _0.221)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 406 aa (-cTP 335)
Molecular Weight 44.47 kDA(-cTP 36.96)
PI 5.14(-cTP 4.78)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1458Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 1)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1653Detail        [A. thaliana]  
1686Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
19995723(chloroplast reference proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help