PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G78480.1   Prenyltransferase family protein

Lab Annot.
Mapman: 16.1.5 secondary metabolism.isoprenoids.terpenoids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G78960.4 11Arabidopsis thaliana5E-3616646570 (0)_
AT1G78960.1 11Arabidopsis thaliana5E-3616646570 (0)_
AT1G78960.3 11Arabidopsis thaliana5E-3616646570 (0)_
Os02g04710.1 7Oryza sativa6E-1915536509 (9)M
Os02g04710.2 7Oryza sativa3E-176656699 (9)S
Os11g08569.1 7Oryza sativa8E-165954740 (0)M
Zm00001eb336350_P001 agpv5Zea mays3E-197546620 (0)M
Zm00001eb208140_P002 agpv5Zea mays4E-1915135500 (0)M
v1_GRMZM2G065494_P02 4a53Zea mays4E-1915135503 (3)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Prenyltrans(1) SQHop_cyclase_N(1)
TargetP: Secreted (Class 1 C0.001; M0.070; S0.981; _0.150)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 2 TMs
TAT position:
Length 202 aa (-cTP 193)
Molecular Weight 23.50 kDA(-cTP )
PI 5.37(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help