PPDB

The Plant Proteome Database

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AT1G78260.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G78260.2 11Arabidopsis thaliana025898980 (0)_
AT1G22330.1 11Arabidopsis thaliana1E-10530769740 (0)_
AT1G76460.1 11Arabidopsis thaliana2E-479772871 (1)_
Os06g11730.1 7Oryza sativa2E-5121449610 (0)C
Os02g51890.1 7Oryza sativa8E-5119255652 (2)C
Os01g65550.2 7Oryza sativa3E-4715060664 (4)_
Zm00001eb255370_P002 agpv5Zea mays2E-5118355680 (0)_
v1_GRMZM2G303915_P02 4a53Zea mays2E-5118355680 (0)_
Zm00001eb255370_P001 agpv5Zea mays2E-5118355680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Nup35_RRM(1) Nup35_RRM_2(1) RRM_1(1) RRM_7(2)
TargetP: Cytoplasm (Class 3 C0.027; M0.296; S0.048; _0.890)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 287 aa (-cTP 214)
Molecular Weight 31.47 kDA(-cTP )
PI 6.70(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help