PPDB

The Plant Proteome Database

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AT1G78170.1   E3 ubiquitin-protein ligase

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G22250.1 11Arabidopsis thaliana3E-5023149570 (0)_
AT4G08910.1 11Arabidopsis thaliana5E-1713639500 (0)_
Os03g09120.1 7Oryza sativa2E-1112035460 (0)C
Os12g13100.1 7Oryza sativa4E-0815031420 (0)_
Os11g18940.1 7Oryza sativa4E-0716425330 (0)_
Zm00001eb006930_P001 agpv5Zea mays3E-103167870 (0)C
AC166636.1_FGP007 3.21Zea mays3E-103167870 (0)C
v1_AC166636.1_FGP007 4a53Zea mays3E-103167870 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3039(1) Spt4(1) TehB(1) zf_C2H2_ZHX(3)
TargetP: Cytoplasm (Class 4 C0.109; M0.429; S0.016; _0.652)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 221 aa (-cTP 203)
Molecular Weight 25.03 kDA(-cTP )
PI 8.63(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help