PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G78110.1   nucleolar GTP-binding protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G22230.1 11Arabidopsis thaliana2E-9833156700 (0)C
Os02g51720.1 7Oryza sativa2E-4434837500 (0)C
Os09g20420.1 7Oryza sativa2E-4336838500 (0)_
v1_AC212754.3_FGP004 4a53Zea mays1E-5635039530 (0)_
AC212754.3_FGP004 3.21Zea mays1E-5635039530 (0)_
Zm00001eb311240_P001 agpv5Zea mays1E-5635039530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2458(1) EFTUD2(2) FAM195(3) GREB1(1) SDA1(1)
TargetP: Chloroplast (Class 2 C0.849; M0.084; S0.008; _0.066)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 342 aa (-cTP 265)
Molecular Weight 39.00 kDA(-cTP 30.93)
PI 5.32(-cTP 4.73)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
21533090(plasmodesmata-crude)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help