PPDB

PPDB	The Plant Proteome Database

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AT1G77860.1 Rhomboid-related intramembrane serine protease family protein

Lab Annot.

rhomboid protease (KOM) - inactive form
Mapman: 29.5.5.10* protein.degradation.serine protease ST.S54

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G77860.2 11 Arabidopsis thaliana 0 350 98 98 0 (0) _
AT2G29050.1 11 Arabidopsis thaliana 2E-84 298 44 61 0 (0) _
AT1G12750.7 11 Arabidopsis thaliana 1E-80 309 41 60 0 (0) M
Os11g47840.1 7 Oryza sativa 1E-83 315 41 60 0 (0) _
Os03g02530.1 7 Oryza sativa 4E-82 294 43 63 0 (0) _
Os08g43320.1 7 Oryza sativa 2E-79 297 44 62 24 (24) _
Zm00001eb021350_P001 agpv5 Zea mays 1E-83 312 41 60 0 (0) _
GRMZM2G093962_P02 3.21 Zea mays 1E-83 312 41 60 0 (0) _
v1_GRMZM2G093962_P02 4a53 Zea mays 1E-83 312 41 60 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1751(2) Holin_BlyA(2) Rhomboid(3) SurA_N_3(2)
TargetP:	Cytoplasm (Class 2 C0.180; M0.045; S0.009; _0.861)
Predotar:
Subcel. Location:
TM-HMM prediction:	7 TMs
Aramemnon:	7 TMs
TAT position:
Length	351 aa (-cTP 287)
Molecular Weight	39.31 kDA(-cTP )
PI	8.92(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data