PPDB

The Plant Proteome Database

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AT1G77640.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G21910.1 11Arabidopsis thaliana3E-6825458700 (0)C
AT1G44830.1 11Arabidopsis thaliana4E-3121048630 (0)C
AT1G74930.1 11Arabidopsis thaliana1E-2713044590 (0)_
Os06g10780.1 7Oryza sativa4E-238969760 (0)_
Os10g41130.1 7Oryza sativa1E-229946640 (0)C
Os03g15660.1 7Oryza sativa3E-229161750 (0)_
v1_GRMZM2G301860_P01 4a53Zea mays9E-276071850 (0)_
Zm00001eb375580_P001 agpv5Zea mays9E-276071850 (0)_
GRMZM2G301860_P01 3.21Zea mays9E-276071850 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1) Dehydrin(2) SR-25(2)
TargetP: Chloroplast (Class 1 C0.956; M0.050; S0.009; _0.095)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 244 aa (-cTP 185)
Molecular Weight 26.98 kDA(-cTP 20.38)
PI 4.97(-cTP 4.23)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help