PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G77630.1 Peptidoglycan-binding LysM domain-containing protein

Lab Annot.

peptidoglycan-binding LysM domain-containing protein
Mapman: 35.1 not assigned.no ontology

Curated Location

plasma membrane

TAIR curated location: anchored to membrane12068095,12805588

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G21880.2 11 Arabidopsis thaliana 0 423 72 83 62 (59) S
AT1G21880.1 11 Arabidopsis thaliana 0 315 79 89 48 (45) S
AT2G17120.1 11 Arabidopsis thaliana 6E-29 309 31 50 43 (30) S
Os06g10660.1 7 Oryza sativa 2E-135 399 50 67 9 (9) S
Os02g53000.1 7 Oryza sativa 2E-124 390 50 68 1 (1) S
Os09g27890.1 7 Oryza sativa 1E-108 357 50 68 0 (0) S
GRMZM2G048194_P01 3.21 Zea mays 1E-122 370 51 70 5 (5) S
Zm00001eb278940_P002 agpv5 Zea mays 1E-122 370 51 70 0 (0) S
v1_GRMZM2G048194_P01 4a53 Zea mays 1E-122 370 51 70 4 (4) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ADAM_CR_2(1) LysM(2)
TargetP:	Secreted (Class 2 C0.050; M0.010; S0.902; _0.163)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	423 aa (-cTP 360)
Molecular Weight	44.15 kDA(-cTP )
PI	4.98(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48

* For details about the exprimental sources click here.

Published Proteomics Data

14517339(GPI anchored suspension cells)
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data