PPDB

The Plant Proteome Database

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AT1G77550.1   tubulin-tyrosine ligase

Lab Annot. protein binding / tubulin-tyrosine ligase
Mapman: 31.1 cell.organisation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g08140.1 7Oryza sativa086460770 (0)_
Os03g08140.2 7Oryza sativa076260760 (0)_
Zm00001eb401890_P001 agpv5Zea mays086661770 (0)_
Zm00001eb401890_P004 agpv5Zea mays071760760 (0)_
GRMZM2G172523_P01 3.21Zea mays051157740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LRR_4(3) LRR_8(2) TTL(1)
TargetP: Secreted (Class 5 C0.028; M0.084; S0.660; _0.599)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 855 aa (-cTP 837)
Molecular Weight 97.54 kDA(-cTP )
PI 4.82(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1587Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help