PPDB

The Plant Proteome Database

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AT1G77405.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39710.1 11Arabidopsis thaliana3E-3527034520 (0)M
AT3G22470.1 11Arabidopsis thaliana3E-3330630482 (2)M
AT1G62910.1 11Arabidopsis thaliana3E-3227929480 (0)M
Os03g52620.1 7Oryza sativa2E-10627355740 (0)M
Os04g38930.1 7Oryza sativa1E-3226932490 (0)M
Os03g55340.1 7Oryza sativa1E-3231429470 (0)_
GRMZM2G147900_P01 3.21Zea mays4E-11342744600 (0)C
v1_GRMZM2G147900_P01 4a53Zea mays4E-11342744600 (0)C
Zm00001eb056380_P001 agpv5Zea mays4E-11342744600 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3368(2) PPR(7) PPR_1(7) PPR_2(6) PPR_3(4) PPR_long(2)
TargetP: Chloroplast (Class 5 C0.261; M0.077; S0.013; _0.260)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 458 aa (-cTP 399)
Molecular Weight 52.99 kDA(-cTP 46.30)
PI 9.45(-cTP 9.37)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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