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AT1G77180.2 chromatin protein family

Lab Annot.

chromatin protein family
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G77180.1 11 Arabidopsis thaliana 0 613 100 100 14 (10) _
AT1G77180.3 11 Arabidopsis thaliana 0 452 100 100 13 (10) _
Os02g52250.1 7 Oryza sativa 0 619 68 81 12 (12) _
Os06g11420.1 7 Oryza sativa 3E-120 568 44 55 0 (0) _
Os02g38400.1 6 Oryza sativa 2E-16 67 55 71 0 (0) M
v1_GRMZM2G478709_P01 4a53 Zea mays 0 617 69 82 23 (23) _
Zm00001eb193840_P003 agpv5 Zea mays 0 617 69 82 0 (0) _
Zm00001eb193840_P001 agpv5 Zea mays 0 617 69 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Drf_GBD(1) HisK_sensor(2) SKIP_SNW(1)
TargetP:	Cytoplasm (Class 2 C0.137; M0.084; S0.067; _0.889)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	613 aa (-cTP 581)
Molecular Weight	69.42 kDA(-cTP )
PI	9.18(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1505	Detail								[A. thaliana]		wild-type
1507	Detail								[A. thaliana]		wild-type
1508	Detail								[A. thaliana]
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
1545	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1557	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	wt
1567	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k2k3

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
20706207(cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data