PPDB

The Plant Proteome Database

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AT1G77030.1   putative DEAD-box ATP-dependent RNA helicase 29

Lab Annot. DEAD box RNA helicase (RH29)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G60990.1 11Arabidopsis thaliana2E-6739436551 (1)_
AT2G33730.1 11Arabidopsis thaliana2E-62395335323 (4)_
AT2G47330.1 11Arabidopsis thaliana2E-6235437583 (2)M
Os08g32090.1 7Oryza sativa075660780 (0)C
Os01g07740.3 7Oryza sativa1E-6336236550 (0)_
Os12g29660.1 7Oryza sativa2E-6336037564 (4)_
Zm00001eb179010_P001 agpv5Zea mays075762790 (0)C
Zm00001eb179010_P002 agpv5Zea mays067258760 (0)_
v1_GRMZM2G484452_P01 4a53Zea mays058853679 (9)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DBP10CT(2) DEAD(1) ERCC3_RAD25_C(1) Helicase_C(3) ResIII(1)
TargetP: Cytoplasm (Class 1 C0.081; M0.069; S0.031; _0.913)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 845 aa (-cTP 776)
Molecular Weight 93.50 kDA(-cTP )
PI 9.90(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


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