PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G77000.1   RNI-like superfamily protein

Lab Annot. RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G77000.2 11Arabidopsis thaliana03601001000 (0)_
AT1G21410.2 11Arabidopsis thaliana036083900 (0)_
AT1G21410.1 11Arabidopsis thaliana036083900 (0)_
Os05g35110.1 7Oryza sativa2E-16237660760 (0)_
Os01g65920.2 7Oryza sativa1E-15333464790 (0)_
Os01g65920.1 7Oryza sativa1E-15333464790 (0)_
Zm00001eb288390_P003 agpv5Zea mays2E-15932767830 (0)_
Zm00001eb288390_P004 agpv5Zea mays2E-15932767830 (0)_
GRMZM2G153075_P03 3.21Zea mays2E-15932767830 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(2) LRR_1(7) LRR_4(7) LRR_6(8) LRR_8(4)
TargetP: Cytoplasm (Class 1 C0.027; M0.046; S0.119; _0.946)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 360 aa (-cTP 292)
Molecular Weight 39.91 kDA(-cTP )
PI 7.45(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help