PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G76920.1   F-box family protein

Lab Annot. F-box protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G61590.3 11Arabidopsis thaliana3E-1139524400 (0)_
AT3G61590.2 11Arabidopsis thaliana3E-1139524400 (0)_
AT3G61590.1 11Arabidopsis thaliana3E-1139524400 (0)_
Os04g57290.1 7Oryza sativa3E-0737022370 (0)C
GRMZM2G104882_P01 3.21Zea mays4E-10440643580 (0)_
Zm00001eb434300_P001 agpv5Zea mays4E-10440643580 (0)_
v1_GRMZM2G104882_P01 4a53Zea mays4E-10440643580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(1) Kelch_1(3) Kelch_2(3) Kelch_6(3)
TargetP: Chloroplast (Class 5 C0.670; M0.033; S0.068; _0.563)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 374 aa (-cTP 350)
Molecular Weight 42.49 kDA(-cTP 39.84)
PI 9.03(-cTP 9.16)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help