PPDB

PPDB	The Plant Proteome Database

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AT1G76760.1 thioredoxin Y1

Lab Annot.

thioredoxin y1 (Trx Y1) - plastid
Mapman: 21.1 redox.thioredoxin

Curated Location

plastid stroma (Pubmed: 23198870 8282737 19259774 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G43560.1 11 Arabidopsis thaliana 5E-68 170 64 79 186 (160) C
AT1G50320.1 11 Arabidopsis thaliana 6E-23 127 39 59 186 (150) C
AT3G15360.1 11 Arabidopsis thaliana 5E-20 96 38 66 259 (240) C
Os01g73234.1 7 Oryza sativa 2E-59 109 76 89 33 (33) C
Os01g73234.2 7 Oryza sativa 2E-59 109 76 89 15 (15) C
Os04g57930.1 7 Oryza sativa 1E-22 98 40 65 28 (28) C
Zm00001eb140270_P001 agpv5 Zea mays 7E-57 109 73 88 0 (0) C
v1_GRMZM2G300066_P01 4a53 Zea mays 7E-57 109 73 88 92 (92) C
GRMZM5G843368_P01 3.21 Zea mays 7E-57 109 73 88 109 (98) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AhpC-TSA(1) HyaE(1) KaiB(1) Redoxin(1) Thioredox_DsbH(1) Thioredoxin(1) Thioredo
TargetP:	Chloroplast (Class 1 C0.976; M0.039; S0.013; _0.062)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	172 aa (-cTP 110)
Molecular Weight	19.25 kDA(-cTP 12.60)
PI	9.03(-cTP 4.99)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data