PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G76520.1   Auxin efflux carrier family protein
Lab Annot.
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G76520.2 11Arabidopsis thaliana03901001000 (0)S
AT1G76530.1 11Arabidopsis thaliana041576850 (0)S
AT1G76530.2 11Arabidopsis thaliana041576850 (0)S
Os09g31478.1 7Oryza sativa4E-14740852680 (0)S
Os09g31478.2 7Oryza sativa2E-12237150660 (0)S
Os09g38130.1 7Oryza sativa2E-11142740600 (0)S
Zm00001eb316860_P001 agpv5Zea mays2E-14241549680 (0)S
GRMZM2G007481_P01 3.21Zea mays5E-14241549680 (0)_
v1_GRMZM2G007481_P01 4a53Zea mays5E-14241549680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Mem_trans(1)
TargetP: Secreted (Class 3 C0.007; M0.044; S0.850; _0.262)
Predotar:
Subcel. Location:
TM-HMM prediction: 10 TMs
Aramemnon: 10 TMs
TAT position:
Length 390 aa (-cTP 329)
Molecular Weight 42.63 kDA(-cTP )
PI 9.13(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 20706207(contaminants cell cycle interactome (cell culture))
21988472(vacuole (unfiltered data))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help