PPDB

PPDB	The Plant Proteome Database

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AT1G76410.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G20823.1 11 Arabidopsis thaliana 6E-85 195 71 82 0 (0) _
AT2G17450.1 11 Arabidopsis thaliana 4E-45 159 54 64 0 (0) _
AT4G35480.1 11 Arabidopsis thaliana 4E-42 148 51 65 0 (0) _
Os02g46100.1 7 Oryza sativa 1E-42 172 50 61 0 (0) _
Os02g58540.1 7 Oryza sativa 5E-38 160 46 63 0 (0) _
Os04g49550.1 7 Oryza sativa 1E-35 170 45 57 0 (0) _
Zm00001eb250960_P001 agpv5 Zea mays 2E-49 172 51 65 0 (0) _
v1_GRMZM2G057789_P01 4a53 Zea mays 2E-49 172 51 65 0 (0) _
GRMZM2G057789_P01 3.21 Zea mays 2E-49 172 51 65 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) Prok-RING_1(2) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC
TargetP:	Cytoplasm (Class 4 C0.125; M0.270; S0.015; _0.564)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	185 aa (-cTP 176)
Molecular Weight	19.92 kDA(-cTP )
PI	8.69(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data