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PPDB	The Plant Proteome Database

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AT1G76010.1 Alba DNA/RNA-binding protein

Lab Annot.

nucleic acid binding
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G76010.2 11 Arabidopsis thaliana 0 350 100 100 0 (0) _
AT1G20220.1 11 Arabidopsis thaliana 8E-89 278 64 70 35 (30) _
AT3G07030.2 11 Arabidopsis thaliana 2E-52 135 61 76 0 (0) _
Os09g37006.2 7 Oryza sativa 2E-73 232 57 66 18 (18) _
Os09g37006.1 7 Oryza sativa 3E-73 232 57 66 18 (18) _
Os04g34940.1 7 Oryza sativa 1E-63 149 69 77 20 (20) _
Zm00001eb103890_P001 agpv5 Zea mays 3E-70 234 60 67 0 (0) _
Zm00001eb103890_P002 agpv5 Zea mays 3E-70 234 60 67 0 (0) _
v1_GRMZM2G146472_P03 4a53 Zea mays 1E-64 143 71 81 25 (25) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Alba(1) API5(2) Rpp20(1)
TargetP:	Cytoplasm (Class 2 C0.057; M0.213; S0.052; _0.815)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	350 aa (-cTP 315)
Molecular Weight	37.38 kDA(-cTP )
PI	9.78(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
325	Detail								BY2 cell suspension [Tobacco]	cell wall enriched	wild-type
1091	Detail								[A. thaliana]		R4Strep Complemented
1175	Detail								leaf [A. thaliana]	co-IP RH3 stroma	wild-type
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1445	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 1)
1539	Detail								leaf [A. thaliana]		wild-type
1618	Detail								[A. thaliana]		m48
2236	Detail								seedlings [A. thaliana]	total tissue	gfs9
2237	Detail								seedlings [A. thaliana]	total tissue	gfs9
2238	Detail								seedlings [A. thaliana]	total tissue	gfs9
2239	Detail								seedlings [A. thaliana]	total tissue	gfs9
2240	Detail								seedlings [A. thaliana]	total tissue	gfs9
2241	Detail								seedlings [A. thaliana]	total tissue	gfs9
2242	Detail								seedlings [A. thaliana]	total tissue	gfs9
2243	Detail								seedlings [A. thaliana]	total tissue	gfs9
2244	Detail								seedlings [A. thaliana]	total tissue	gfs9
2245	Detail								seedlings [A. thaliana]	total tissue	wild-type
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2254	Detail								leaf [A. thaliana]	total seedlings	gfs9
2255	Detail								leaf [A. thaliana]	total seedlings	gfs9
2256	Detail								leaf [A. thaliana]	total seedlings	gfs9
2257	Detail								leaf [A. thaliana]	total seedlings	gfs9
2258	Detail								leaf [A. thaliana]	total seedlings	gfs9
2259	Detail								leaf [A. thaliana]	total seedlings	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19253305(phosphoproteins (etiolated seedling))
19816138(rosette leaves)
22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data