PPDB

The Plant Proteome Database

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AT1G75680.1   glycosyl hydrolase 9B7

Lab Annot. glycosyl hydrolase family 9 protein, endo-beta-1,4-glucanase
Mapman: 10.6.1 cell wall.degradation.cellulases and beta -1,4-glucanases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G19940.2 11Arabidopsis thaliana047674850 (0)S
AT1G19940.1 11Arabidopsis thaliana047674850 (0)S
AT1G19940.3 11Arabidopsis thaliana038373840 (0)S
Os09g36350.1 7Oryza sativa0528657816 (16)S
Os06g50140.1 7Oryza sativa051761760 (0)S
Os09g36350.2 7Oryza sativa6E-16236666788 (8)S
GRMZM2G153987_P01 3.21Zea mays048961770 (0)S
GRMZM2G147422_P01 3.21Zea mays052263785 (5)S
v1_GRMZM2G147422_P01 4a53Zea mays052263784 (4)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_9(1)
TargetP: Secreted (Class 2 C0.002; M0.065; S0.957; _0.288)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 525 aa (-cTP 493)
Molecular Weight 57.87 kDA(-cTP )
PI 6.77(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
21826108(SYP trans-Golgi-filtered)
20843791(DRM-enriched plasmamembrane)

Comparative Proteomics Data


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