PPDB

 The Plant Proteome Database

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AT1G75600.1   Histone superfamily protein
Lab Annot. histone H3
Mapman: 28.1.3 DNA.synthesis/chromatin structure.histone
Curated Location nucleus
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G40040.3 11Arabidopsis thaliana6E-9213696970 (0)C
AT5G10980.1 11Arabidopsis thaliana6E-92136969714 (14)C
AT4G40030.1 11Arabidopsis thaliana6E-92136969714 (14)C
Os06g04030.1 7Oryza sativa6E-92136969710 (10)C
Os03g27310.2 7Oryza sativa6E-92136969710 (10)C
Os03g27310.1 7Oryza sativa6E-92136969710 (10)C
GRMZM2G171387_P01 3.21Zea mays6E-92136969727 (27)C
Zm00001eb018990_P002 agpv5Zea mays6E-9213696970 (0)C
Zm00001eb018990_P003 agpv5Zea mays6E-9213696970 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CBFD_NFYB_HMF(1) CENP-S(1) CENP-T_C(1) Histone(1) PAF(1) TFIID-31kDa(1)
TargetP: Mitochondria (Class 5 C0.496; M0.539; S0.022; _0.063)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 136 aa (-cTP 83)
Molecular Weight 15.40 kDA(-cTP )
PI 11.00(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2243Detail       seedlings [A. thaliana] total tissue gfs9
2246Detail       seedlings [A. thaliana] total tissue gfs9
2309Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 18814325(cotyledons)
19200160(flower-stage 12)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help