PPDB

PPDB	The Plant Proteome Database

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AT1G75560.1 zinc knuckle (CCHC-type) family protein

Lab Annot.

Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G75560.2 11 Arabidopsis thaliana 0 257 100 100 0 (0) C
AT4G36020.1 11 Arabidopsis thaliana 1E-13 165 33 41 21 (8) _
AT4G36020.3 11 Arabidopsis thaliana 1E-13 165 33 41 0 (0) _
Os10g39820.1 7 Oryza sativa 4E-93 239 58 72 0 (0) C
Os03g60600.1 7 Oryza sativa 3E-73 203 53 70 0 (0) C
Os03g60600.2 7 Oryza sativa 9E-57 174 51 69 0 (0) C
Zm00001eb022680_P003 agpv5 Zea mays 2E-89 253 54 69 0 (0) M
Zm00001eb022680_P002 agpv5 Zea mays 2E-89 253 54 69 0 (0) M
GRMZM2G127168_P01 3.21 Zea mays 2E-89 253 54 69 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	zf-CCHC(8) zf-CCHC_2(8) zf-CCHC_3(7) zf-CCHC_4(8) zf-CCHC_5(8)
TargetP:	Chloroplast (Class 3 C0.819; M0.323; S0.004; _0.037)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	257 aa (-cTP 227) (-lTP 171)
Molecular Weight	28.68 kDA(-cTP 24.91)(-lTP 18.65)
PI	9.73(-cTP 9.01)(-lTP 8.903)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data