PPDB

The Plant Proteome Database

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AT1G75520.1   SHI-related sequence 5

Lab Annot.
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G19790.2 11Arabidopsis thaliana7E-14137763700 (0)_
AT1G19790.1 11Arabidopsis thaliana7E-14137763700 (0)_
AT3G51060.1 11Arabidopsis thaliana1E-6124646590 (0)_
Os09g36160.1 7Oryza sativa5E-4823741550 (0)_
Os06g49830.1 7Oryza sativa3E-4623842540 (0)_
Os08g43410.1 7Oryza sativa1E-4316350610 (0)_
GRMZM2G108798_P01 3.21Zea mays2E-4930638500 (0)_
v1_GRMZM2G108798_P01 4a53Zea mays2E-4930638500 (0)_
Zm00001eb272500_P001 agpv5Zea mays2E-4930638500 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: cwf18(2) DUF702(2)
TargetP: Cytoplasm (Class 1 C0.028; M0.153; S0.025; _0.968)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 346 aa (-cTP 259)
Molecular Weight 38.55 kDA(-cTP )
PI 6.67(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help