PPDB

PPDB	The Plant Proteome Database

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AT1G75340.1 Zinc finger C-x8-C-x5-C-x3-H type family protein

Lab Annot.

Nucleoporin Seh1
Mapman: 29.3.1 protein.targeting.nucleus

Curated Location

nucleus (Pubmed: 21189294 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G75340.3 11 Arabidopsis thaliana 0 435 86 86 0 (0) M
AT1G75340.2 11 Arabidopsis thaliana 0 455 82 83 0 (0) M
Os06g49080.1 7 Oryza sativa 7E-58 276 47 58 0 (0) M
Zm00001eb227240_P001 agpv5 Zea mays 3E-55 269 44 57 0 (0) M
v1_GRMZM2G089050_P01 4a53 Zea mays 3E-55 269 44 57 2 (2) M
GRMZM2G089050_P01 3.21 Zea mays 3E-55 269 44 57 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Torus(1) zf-CCCH(1) zf-CCCH_2(1) zf-CCCH_4(1) zf_CCCH_4(1)
TargetP:	Mitochondria (Class 2 C0.054; M0.882; S0.002; _0.141)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	435 aa (-cTP 347)
Molecular Weight	46.80 kDA(-cTP )
PI	8.81(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data