PPDB

 The Plant Proteome Database

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AT1G75040.1   pathogenesis-related protein 5
Lab Annot. PR5 (PATHOGENESIS-RELATED GENE 5)
Mapman: 20.1 stress.biotic
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G75050.1 11Arabidopsis thaliana5E-13024374850 (0)S
AT1G75030.1 11Arabidopsis thaliana6E-12324371810 (0)S
AT1G19320.1 11Arabidopsis thaliana2E-10424663720 (0)S
Os03g13070.1 7Oryza sativa2E-8524956650 (0)S
Os08g43510.1 7Oryza sativa7E-8423955650 (0)S
Os10g05660.1 7Oryza sativa5E-7824953630 (0)S
GRMZM2G049057_P02 3.21Zea mays7E-8323955650 (0)S
Zm00001eb040100_P003 agpv5Zea mays7E-8323955650 (0)S
v1_GRMZM2G049057_P02 4a53Zea mays7E-8323955650 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Thaumatin(1)
TargetP: Secreted (Class 1 C0.087; M0.005; S0.982; _0.040)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 239 aa (-cTP 175)
Molecular Weight 25.25 kDA(-cTP )
PI 4.75(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
310Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-TAPlong
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1420Detail        [A. thaliana]  
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1541Detail       leaf [A. thaliana] Thylakoids plastoglobuleM-48
1542Detail       leaf [A. thaliana] wild-type
1620Detail        [A. thaliana] m48
1653Detail        [A. thaliana]  
1654Detail        [A. thaliana]  
1655Detail        [A. thaliana]  
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2028Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2211Detail       leaf [A. thaliana] total leaf tissue Clp P5 Trapst 12
2225Detail       leaf [A. thaliana] total leaf tissue Clp P3 trap
2226Detail       leaf [A. thaliana] total leaf tissue wild-type
2262Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2398Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/35SRecA-GFP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 15539469(vacuole)
15593128(Cell Wall proteome)
15276459(epidermis)
18538804(apoplast)
18436743(specific to flower)
20682788(root secretome)
19525416(leaf (wt and clpr4-1 mutant))
19888209(80S polysomal fraction)
19888209(leaves)
19114538(guard cells Arabidopsis leaf)
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data

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