PPDB

The Plant Proteome Database

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AT1G74790.1   catalytics

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location plasma membrane

TAIR curated location: anchored to membrane12068095,10451111,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62630.1 11Arabidopsis thaliana065763772 (1)S
AT5G39970.1 11Arabidopsis thaliana064657730 (0)S
AT5G39970.3 11Arabidopsis thaliana063457730 (0)S
Os03g48540.1 7Oryza sativa063859770 (0)S
Os12g44230.1 7Oryza sativa069957730 (0)M
Os07g09520.1 7Oryza sativa065854690 (0)S
Zm00001eb134000_P003 agpv5Zea mays065657730 (0)M
Zm00001eb134000_P001 agpv5Zea mays065157730 (0)M
Zm00001eb302660_P002 agpv5Zea mays067853670 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GSDH(1)
TargetP: Secreted (Class 1 C0.008; M0.068; S0.886; _0.006)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 695 aa (-cTP 631)
Molecular Weight 75.22 kDA(-cTP )
PI 5.28(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

12805588(GBI-anchored-callus)
14517339(GPI anchored suspension cells)
16602701(GPI-anchored Plasma membrane suspension cells)
16618929(PlasmaMembrane-LOPIT-callus)
17317660(Plasma Membrane proteome)
18998720(SA-induced secreted proteome (cell culture))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


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