PPDB

PPDB	The Plant Proteome Database

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AT1G74600.1 pentatricopeptide (PPR) repeat-containing protein

Lab Annot.

OTP87 - pentatricopeptide (PPR) repeat protein - editing
Mapman: 27.1.5* RNA.processing.editing

Curated Location

mitochondria (Pubmed: 21504904 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G13650.1 11 Arabidopsis thaliana 2E-150 817 32 54 1 (1) _
AT3G09040.1 11 Arabidopsis thaliana 3E-130 815 31 52 0 (0) M
AT3G09040.4 11 Arabidopsis thaliana 3E-130 815 31 52 0 (0) M
Os09g24680.1 7 Oryza sativa 0 768 40 61 0 (0) M
Os12g36620.1 7 Oryza sativa 8E-149 725 34 57 0 (0) _
Os01g10800.1 7 Oryza sativa 1E-137 834 31 53 2 (2) C
GRMZM2G040947_P01 3.21 Zea mays 0 746 41 62 0 (0) C
v1_GRMZM2G040947_P01 4a53 Zea mays 0 746 41 62 0 (0) C
Zm00001eb312530_P001 agpv5 Zea mays 0 746 41 62 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(4) BTAD(2) DUF4003(1) Homez(1) PPR(19) PPR_1(17) PPR_2(13) PPR_3(10) PPR_l
TargetP:	Chloroplast (Class 1 C0.912; M0.083; S0.012; _0.035)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:	76
Length	895 aa (-cTP 824) (-lTP 792)
Molecular Weight	98.65 kDA(-cTP 90.69)(-lTP 87.03)
PI	5.88(-cTP 5.59)(-lTP 5.499)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data