PPDB

The Plant Proteome Database

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AT1G74560.1   NAP1-related protein 1

Lab Annot. nucleosome assembly protein (NAP) protein
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
TAIR curated location: nucleus & cytoplasm15610358,15469496
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G74560.2 10Arabidopsis thaliana0257999914 (9)_
AT1G74560.3 11Arabidopsis thaliana1E-15621610010024 (13)_
AT1G18800.1 11Arabidopsis thaliana2E-13522686919 (6)_
Os02g36710.1 7Oryza sativa6E-100225678138 (38)_
Os04g38620.1 7Oryza sativa3E-8522656764 (4)_
Os06g40920.1 7Oryza sativa2E-1324324480 (0)_
v1_GRMZM2G075637_P01 4a53Zea mays3E-90225647937 (37)_
Zm00001eb244920_P001 agpv5Zea mays3E-9022564790 (0)_
GRMZM2G075637_P01 3.21Zea mays3E-90225647937 (37)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DASH_Ask1(1) DUF1195(1) NAP(2) NOA36(1) SecA_SW(1)
TargetP: Cytoplasm (Class 2 C0.108; M0.079; S0.134; _0.908)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 256 aa (-cTP 254)
Molecular Weight 29.42 kDA(-cTP )
PI 4.23(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
94Detail       root [B. rapa] plastid stroma 
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2245Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16358359(cell suspension (M&Skoog))
16502469(cell suspension-Cd-up)
11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18599647(seed proteome)
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
20813957(SUMO proteome)

Comparative Proteomics Data


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