PPDB

PPDB	The Plant Proteome Database

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AT1G74410.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G66070.1 11 Arabidopsis thaliana 4E-53 216 38 60 0 (0) _
AT5G66070.5 11 Arabidopsis thaliana 4E-53 216 38 60 0 (0) _
AT5G66070.2 11 Arabidopsis thaliana 8E-49 240 35 55 0 (0) _
Os02g50990.3 7 Oryza sativa 2E-75 202 58 74 0 (0) _
Os02g50990.2 7 Oryza sativa 2E-75 202 58 74 0 (0) _
Os06g12560.1 7 Oryza sativa 6E-65 203 51 66 0 (0) _
v1_GRMZM2G140651_P02 4a53 Zea mays 4E-67 207 56 72 0 (0) _
Zm00001eb254430_P002 agpv5 Zea mays 4E-67 207 56 72 0 (0) _
GRMZM2G140651_P02 3.21 Zea mays 4E-67 207 56 72 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Bacteriocin_IIc(1) DUF1269(2) FANCL_C(1) Gly-zipper_Omp(2) Gly-zipper_OmpA(1) Gl
TargetP:	Cytoplasm (Class 1 C0.041; M0.071; S0.040; _0.966)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	2 TMs
TAT position:
Length	223 aa (-cTP 160)
Molecular Weight	24.26 kDA(-cTP )
PI	5.69(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data