PPDB

The Plant Proteome Database

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AT1G74210.1   PLC-like phosphodiesterases superfamily protein

Lab Annot.
Mapman: 11.9.3.3 lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08030.1 11Arabidopsis thaliana035176860 (0)S
AT5G08030.2 11Arabidopsis thaliana035176860 (0)M
AT5G58170.1 11Arabidopsis thaliana2E-2033826440 (0)S
Os01g55780.1 7Oryza sativa037867790 (0)S
Os03g40670.1 7Oryza sativa034869840 (0)S
Os07g41150.1 7Oryza sativa1E-16333765780 (0)M
Zm00001eb050070_P002 agpv5Zea mays035567810 (0)S
GRMZM2G153274_P01 3.21Zea mays036868820 (0)S
Zm00001eb370370_P001 agpv5Zea mays036868820 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GDPD(1)
TargetP: Mitochondria (Class 4 C0.059; M0.540; S0.237; _0.009)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 392 aa (-cTP 375)
Molecular Weight 45.02 kDA(-cTP )
PI 6.60(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
19546170(mature pollen grains)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help