PPDB

PPDB	The Plant Proteome Database

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AT1G73950.1 Transmembrane Fragile-X-F-associated protein

Lab Annot.

Transmembrane Fragile-X-F-associated protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G73950.2 11 Arabidopsis thaliana 0 466 93 93 0 (0) S
AT1G18470.1 11 Arabidopsis thaliana 0 467 83 91 0 (0) S
AT1G18470.2 11 Arabidopsis thaliana 0 389 82 91 0 (0) S
Os03g49900.1 7 Oryza sativa 0 449 69 82 0 (0) M
Os10g36880.1 7 Oryza sativa 7E-08 47 48 65 0 (0) C
GRMZM2G024690_P01 3.21 Zea mays 0 449 69 82 0 (0) M
v1_GRMZM2G024690_P01 4a53 Zea mays 0 449 69 82 0 (0) M
Zm00001eb216620_P001 agpv5 Zea mays 0 398 70 84 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(1) Tmemb_185A(1) zf-C3HC4_3(1) zf-RING_2(1) zf-RING_5(1)
TargetP:	Secreted (Class 4 C0.002; M0.249; S0.591; _0.056)
Predotar:
Subcel. Location:
TM-HMM prediction:	7 TMs
Aramemnon:	7 TMs
TAT position:
Length	466 aa (-cTP 414)
Molecular Weight	52.91 kDA(-cTP )
PI	6.08(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)

Comparative Proteomics Data