PPDB

The Plant Proteome Database

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AT1G73940.1   tumor necrosis factor receptor family protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G49410.1 11Arabidopsis thaliana1E-2311437596 (6)_
AT5G49410.2 11Arabidopsis thaliana1E-2311437596 (6)_
Os03g63550.1 7Oryza sativa2E-3811753711 (1)_
Os08g27140.1 7Oryza sativa6E-187636680 (0)M
Zm00001eb210620_P001 agpv5Zea mays2E-339456780 (0)_
v1_GRMZM2G384070_P01 4a53Zea mays2E-339456781 (1)_
GRMZM2G384070_P01 3.21Zea mays2E-339456781 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Mitochondria (Class 3 C0.048; M0.698; S0.007; _0.263)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 151 aa (-cTP 136)
Molecular Weight 17.08 kDA(-cTP )
PI 10.24(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21311031(mitochondria)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help