PPDB

The Plant Proteome Database

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AT1G73850.1   DNA ligase (DUF1666)

Lab Annot. unknown function (DUF1666)
Mapman: 29.2.1.2.2.34 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L34
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G73850.2 11Arabidopsis thaliana06351001000 (0)S
AT3G20260.1 11Arabidopsis thaliana2E-4635935501 (1)_
AT1G69610.1 11Arabidopsis thaliana4E-2224032520 (0)_
Os01g03870.1 7Oryza sativa3E-10137950660 (0)M
Os08g40820.2 7Oryza sativa6E-3832331510 (0)_
Os08g40820.1 7Oryza sativa6E-3832331510 (0)_
Zm00001eb335110_P001 agpv5Zea mays1E-9335149670 (0)M
v1_GRMZM2G175398_P04 4a53Zea mays1E-9335149670 (0)M
Zm00001eb125430_P001 agpv5Zea mays2E-9335350670 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1666(2) IL2(1)
TargetP: Secreted (Class 2 C0.009; M0.055; S0.969; _0.184)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 635 aa (-cTP 629)
Molecular Weight 73.59 kDA(-cTP )
PI 4.86(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
22060019(phosphoproteome - N-starved seedlings)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


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