PPDB

The Plant Proteome Database

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AT1G73820.1   Ssu72-like family protein

Lab Annot. Ssu72-like protein
Mapman: 29.4.5 protein.postranslational modification.phosphatase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G73820.2 11Arabidopsis thaliana8E-1461931001000 (0)C
Os12g07050.1 7Oryza sativa8E-10619368880 (0)M
Os12g07050.2 7Oryza sativa4E-9016071890 (0)M
Os12g07050.3 7Oryza sativa1E-5712562850 (0)M
Zm00001eb139180_P001 agpv5Zea mays3E-10819372870 (0)M
GRMZM2G006806_P01 3.21Zea mays3E-10819372879 (5)M
v1_GRMZM2G006806_P01 4a53Zea mays3E-10819372878 (8)M

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ssu72(1)
TargetP: Mitochondria (Class 2 C0.017; M0.853; S0.042; _0.198)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 193 aa (-cTP 185)
Molecular Weight 22.29 kDA(-cTP )
PI 5.65(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
303Detail       leaf [A. thaliana] chloroplast stromawild-type
326Detail       leaf [A. thaliana] chloroplast stromawild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
412Detail       leaf [A. thaliana] stroma - R-X102 tag-CNPAGE clpr2-1-TapTagR2
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
869Detail       leaf [A. thaliana] chloroplast stromawild-type
871Detail       leaf [A. thaliana] chloroplast stromawild-type
873Detail       leaf [A. thaliana] chloroplast stromawild-type
1987Detail       leaf [A. thaliana] plastid Prep1_Prep2

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help