PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G73630.1   EF hand calcium-binding protein family

Lab Annot. EF hand calcium-binding protein family
Mapman: 30.3 signalling.calcium
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G18210.1 11Arabidopsis thaliana9E-801557485124 (100)_
AT1G18210.2 11Arabidopsis thaliana9E-801557485124 (100)_
AT1G66400.1 11Arabidopsis thaliana2E-3913747720 (0)_
Os01g72100.1 7Oryza sativa4E-4215644692 (2)M
Os05g13580.1 7Oryza sativa1E-3914346640 (0)_
Os01g04330.1 7Oryza sativa1E-3614345650 (0)_
v1_GRMZM2G474755_P01 4a53Zea mays1E-3814845700 (0)M
Zm00001eb347180_P001 agpv5Zea mays1E-3814845700 (0)M
GRMZM2G474755_P01 3.21Zea mays1E-3814845700 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Caleosin(2) Dockerin_1(4) DUF2666(2) EF-hand_1(4) EF-hand_11(2) EF-hand_14(2) EF
TargetP: Cytoplasm (Class 2 C0.177; M0.083; S0.087; _0.893)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 163 aa (-cTP 146)
Molecular Weight 18.00 kDA(-cTP )
PI 4.39(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19376835(leaf phosphoproteins)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help