PPDB

The Plant Proteome Database

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AT1G73620.1   Pathogenesis-related thaumatin superfamily protein

Lab Annot. Pathogenesis-related thaumatin
Mapman: 20.1 stress.biotic
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G18250.1 11Arabidopsis thaliana3E-14922687948 (1)S
AT1G18250.2 11Arabidopsis thaliana1E-14722486958 (1)S
AT1G75030.1 11Arabidopsis thaliana4E-8924854660 (0)S
Os06g47600.1 7Oryza sativa2E-11424964770 (0)S
Os08g43510.1 7Oryza sativa1E-7624054620 (0)S
Os10g05660.1 7Oryza sativa2E-7625450620 (0)S
v1_GRMZM2G476523_P01 4a53Zea mays7E-11223865790 (0)S
Zm00001eb226040_P001 agpv5Zea mays7E-11223865790 (0)S
GRMZM2G476523_P01 3.21Zea mays7E-11223865790 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Thaumatin(1)
TargetP: Cytoplasm (Class 4 C0.128; M0.079; S0.143; _0.532)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 264 aa (-cTP 227)
Molecular Weight 28.21 kDA(-cTP )
PI 9.01(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
2214Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2225Detail       leaf [A. thaliana] total leaf tissue Clp P3 trap
2287Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help