PPDB

PPDB	The Plant Proteome Database

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AT1G73400.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G62470.1 11 Arabidopsis thaliana 4E-68 551 26 48 0 (0) M
AT5G14820.1 11 Arabidopsis thaliana 4E-67 494 26 50 0 (0) M
AT3G62540.1 11 Arabidopsis thaliana 6E-67 551 26 48 0 (0) M
Os02g52220.1 7 Oryza sativa 0 560 51 68 0 (0) M
Os03g55340.1 7 Oryza sativa 4E-58 433 28 49 0 (0) _
Os05g28720.1 7 Oryza sativa 1E-54 456 28 47 0 (0) S
v1_GRMZM2G110952_P06 4a53 Zea mays 0 471 55 76 0 (0) C
GRMZM2G110952_P10 3.21 Zea mays 0 471 55 76 0 (0) C
v1_GRMZM2G161175_P01 4a53 Zea mays 0 472 56 75 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	HrpB1_HrpK(3) MRP-S27(3) PPR(9) PPR_1(8) PPR_2(9) PPR_3(7) PPR_long(4) SelB-wing
TargetP:	Mitochondria (Class 2 C0.101; M0.794; S0.006; _0.010)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	568 aa (-cTP 500)
Molecular Weight	65.68 kDA(-cTP )
PI	8.46(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1758	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag+fosmidomycin

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data