PPDB

PPDB	The Plant Proteome Database

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AT1G73250.1 GDP-4-keto-6-deoxymannose-3%2C5-epimerase-4-reductase 1

Lab Annot.

Mapman: 10.1.8 cell wall.precursor synthesis.GER

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G17890.1 11 Arabidopsis thaliana 0 326 86 92 51 (26) _
AT1G17890.2 11 Arabidopsis thaliana 0 314 88 94 54 (29) _
AT1G17890.3 11 Arabidopsis thaliana 0 314 88 94 54 (29) _
Os06g44270.1 7 Oryza sativa 0 320 75 87 19 (19) _
Os06g44260.1 7 Oryza sativa 6E-132 315 59 75 0 (0) _
Os10g28200.1 7 Oryza sativa 1E-20 323 24 42 43 (43) _
GRMZM2G029856_P01 3.21 Zea mays 0 314 75 88 18 (18) M
v1_GRMZM2G029856_P01 4a53 Zea mays 0 314 75 88 10 (10) M
Zm00001eb388990_P001 agpv5 Zea mays 0 314 75 88 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	3Beta_HSD(1) CofC(1) Epimerase(1) GDP_Man_Dehyd(2) NmrA(2) Polysacc_synt_2(2) Rm
TargetP:	Cytoplasm (Class 3 C0.256; M0.123; S0.045; _0.728)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	323 aa (-cTP 295)
Molecular Weight	35.57 kDA(-cTP )
PI	6.13(-cTP )

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data