PPDB

The Plant Proteome Database

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AT1G73240.1   nucleoporin protein Ndc1-Nup protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os02g45920.1 7Oryza sativa9E-10241243620 (0)M
v1_GRMZM2G376292_P01 4a53Zea mays3E-10039843620 (0)M
Zm00001eb187400_P003 agpv5Zea mays5E-9939843620 (0)_
GRMZM2G528010_P02 3.21Zea mays5E-9939843620 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MFS_1(1)
TargetP: Cytoplasm (Class 4 C0.017; M0.025; S0.023; _0.414)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 519 aa (-cTP 456)
Molecular Weight 57.42 kDA(-cTP )
PI 9.16(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


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