PPDB

The Plant Proteome Database

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AT1G73190.1   Aquaporin-like superfamily protein

Lab Annot. alpha tonoplast intrinsic protein (alpha-TIP)
Mapman: 34.19.2 transport.Major Intrinsic Proteins.TIP
Curated Location vacuole-tonoplast (Pubmed: 1790586 )

TAIR curated location: protein storage vacuole & vacuolar membrane (sensu Magnoliophyta)16227454
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G17810.1 11Arabidopsis thaliana1E-15127084915 (5)_
AT4G01470.1 11Arabidopsis thaliana2E-9925757720 (0)_
AT2G36830.1 11Arabidopsis thaliana2E-992625668433 (432)_
Os10g35050.1 7Oryza sativa2E-11126264800 (0)_
Os03g05290.1 7Oryza sativa2E-882625667126 (126)_
Os01g74450.1 7Oryza sativa2E-8725754706 (6)_
GRMZM2G103983_P01 3.21Zea mays4E-11426462780 (0)M
v1_GRMZM2G103983_P01 4a53Zea mays4E-11426462780 (0)M
Zm00001eb044880_P002 agpv5Zea mays4E-11426462780 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MIP(1)
TargetP: Cytoplasm (Class 4 C0.011; M0.558; S0.013; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 268 aa (-cTP 244)
Molecular Weight 28.31 kDA(-cTP )
PI 7.20(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17293592(total seedlings û light and dark grown)
18436743(specific to seeds)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help