PPDB

 The Plant Proteome Database

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AT1G73170.1   P-loop containing nucleoside triphosphate hydrolases superfamily protein
Lab Annot. SPD1 homolog
Mapman: 26.55* misc.AAA domain
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G73170.3 11Arabidopsis thaliana06601001000 (0)C
AT1G73170.2 11Arabidopsis thaliana052310010018 (17)M
AT1G73170.4 11Arabidopsis thaliana03921001000 (0)_
Os06g06190.1 7Oryza sativa059061750 (0)C
Os07g08970.1 7Oryza sativa057551680 (0)C
Os12g10640.1 7Oryza sativa3E-11433552724 (4)C
v1_GRMZM2G147819_P01 4a53Zea mays062347655 (5)C
GRMZM2G147819_P01 3.21Zea mays0623476521 (21)C
GRMZM2G011319_P02 3.21Zea mays0577597526 (23)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA(1) AAA_11(1) AAA_14(1) AAA_16(1) AAA_18(1) AAA_19(1) AAA_2(1) AAA_22(1) AAA_
TargetP: Chloroplast (Class 3 C0.617; M0.147; S0.008; _0.071)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 666 aa (-cTP 606)
Molecular Weight 73.73 kDA(-cTP 67.09)
PI 5.20(-cTP 4.96)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
303Detail       leaf [A. thaliana] chloroplast stromawild-type
339Detail       leaf [A. thaliana] chloroplast stromawild-type
541Detail       leaf [A. thaliana] stroma (FPLC) >1 MDa stromawild-type
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
869Detail       leaf [A. thaliana] chloroplast stromawild-type
870Detail       leaf [A. thaliana] chloroplast stromawild-type
871Detail       leaf [A. thaliana] chloroplast stromawild-type
874Detail       leaf [A. thaliana] chloroplast stromawild-type
1481Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
2001Detail       leaf [A. thaliana] stroma ClpS stromaclpS1
2061Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2063Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2069Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2071Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2085Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2112Detail       leaf [A. thaliana] Stroma stromawt
2113Detail       leaf [A. thaliana] Stroma stromawt
2114Detail       leaf [A. thaliana] Stroma stromawt
2116Detail       leaf [A. thaliana] Stroma stromacGep
2117Detail       leaf [A. thaliana] Stroma stromacGep
2143Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2146Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2152Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2311Detail       leaf [A. thaliana] PG plastoglobule 
2316Detail       leaf [A. thaliana] PG plastoglobule 
2319Detail       leaf [A. thaliana] PG plastoglobule 
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
18436743(specific to leaves)
20423899(chloroplast)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data

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