PPDB

The Plant Proteome Database

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AT1G72980.1   LOB domain-containing protein 7

Lab Annot.
Mapman: 27.3.37 RNA.regulation of transcription.AS2,Lateral Organ Boundaries Gene Family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G13850.1 11Arabidopsis thaliana2E-3511848680 (0)C
AT3G47870.1 11Arabidopsis thaliana4E-2411439610 (0)S
AT1G16530.1 11Arabidopsis thaliana7E-2414736550 (0)_
Os08g31080.1 7Oryza sativa6E-3110553650 (0)C
Os09g19950.1 7Oryza sativa6E-2810747610 (0)C
Os01g39150.1 7Oryza sativa4E-2410540640 (0)C
Zm00001eb042180_P001 agpv5Zea mays1E-2710549630 (0)C
AC217910.3_FGP006 3.21Zea mays1E-2710549630 (0)C
v1_AC217910.3_FGP006 4a53Zea mays1E-2710549630 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3947(2) LAX(1) LOB(1)
TargetP: Chloroplast (Class 5 C0.491; M0.151; S0.098; _0.322)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 214 aa (-cTP 212) (-lTP 94)
Molecular Weight 24.85 kDA(-cTP 24.63)(-lTP 11.30)
PI 8.39(-cTP 8.40)(-lTP 4.788)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help