PPDB

PPDB	The Plant Proteome Database

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AT1G72960.1 Root hair defective 3 GTP-binding protein (RHD3)

Lab Annot.

Mapman: 33.99 development.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G72960.2 11 Arabidopsis thaliana 0 672 100 100 0 (0) _
AT3G13870.1 11 Arabidopsis thaliana 0 777 77 89 84 (78) _
AT3G13870.2 11 Arabidopsis thaliana 0 710 76 89 77 (76) _
Os01g39310.1 7 Oryza sativa 0 768 69 84 42 (42) _
Os01g39310.3 7 Oryza sativa 0 698 70 85 37 (37) _
Os12g41170.1 7 Oryza sativa 0 758 64 80 0 (0) _
GRMZM2G418160_P01 3.21 Zea mays 0 768 58 74 1 (1) _
AC196426.3_FGP007 3.21 Zea mays 0 797 57 72 25 (23) _
v1_AC196426.3_FGP007 4a53 Zea mays 0 797 57 72 10 (10) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_14(1) AAA_16(1) AAA_28(1) AAA_29(1) ABC_tran(1) Dynamin_N(1) GBP(1) MMR_HSR1
TargetP:	Cytoplasm (Class 1 C0.096; M0.081; S0.071; _0.933)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	3 TMs
TAT position:
Length	795 aa (-cTP 708)
Molecular Weight	88.82 kDA(-cTP )
PI	5.40(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17660356(tonoplast (Brassica oleracea buds))
18436743(specific to flower)
19546170(mature pollen grains)

Comparative Proteomics Data