PPDB

The Plant Proteome Database

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AT1G72960.1   Root hair defective 3 GTP-binding protein (RHD3)

Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G72960.2 11Arabidopsis thaliana06721001000 (0)_
AT3G13870.1 11Arabidopsis thaliana0777778978 (78)_
AT3G13870.2 11Arabidopsis thaliana0710768976 (76)_
Os01g39310.1 7Oryza sativa0768698442 (42)_
Os01g39310.3 7Oryza sativa0698708537 (37)_
Os12g41170.1 7Oryza sativa075864800 (0)_
GRMZM2G418160_P01 3.21Zea mays076858741 (1)_
AC196426.3_FGP007 3.21Zea mays0797577223 (23)_
v1_AC196426.3_FGP007 4a53Zea mays0797577210 (10)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_14(1) AAA_16(1) AAA_28(1) AAA_29(1) ABC_tran(1) Dynamin_N(1) GBP(1) MMR_HSR1
TargetP: Cytoplasm (Class 1 C0.096; M0.081; S0.071; _0.933)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 3 TMs
TAT position:
Length 795 aa (-cTP 708)
Molecular Weight 88.82 kDA(-cTP )
PI 5.40(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17660356(tonoplast (Brassica oleracea buds))
18436743(specific to flower)
19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help