PPDB

 The Plant Proteome Database

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AT1G72680.1   cinnamyl-alcohol dehydrogenase
Lab Annot. cinnamyl-alcohol dehydrogenase
Mapman: 16.2.1.10 secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G21890.1 11Arabidopsis thaliana2E-11335150670 (0)_
AT4G39330.1 11Arabidopsis thaliana4E-1133574967410 (242)_
AT2G21730.1 11Arabidopsis thaliana8E-11235050670 (0)_
Os10g11810.1 7Oryza sativa035370851 (1)_
Os10g11810.2 7Oryza sativa035370851 (1)_
Os11g40690.1 7Oryza sativa6E-17335367810 (0)_
GRMZM2G090980_P04 3.21Zea mays0353718320 (0)_
GRMZM2G090980_P03 3.21Zea mays0353718320 (0)_
GRMZM2G090980_P01 3.21Zea mays0353718320 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 2-Hacid_dh_C(1) ADH_N(1) ADH_zinc_N(1) ADH_zinc_N_2(1) AlaDh_PNT_C(1)
TargetP: Chloroplast (Class 5 C0.604; M0.049; S0.190; _0.552)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 355 aa (-cTP 343)
Molecular Weight 38.67 kDA(-cTP 37.36)
PI 6.66(-cTP 7.69)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2287Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18599647(seed proteome)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data

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