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PPDB	The Plant Proteome Database

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AT1G72560.1 ARM repeat superfamily protein

Lab Annot.

karyopherin
Mapman: 34.99 transport.misc

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G72560.6 11 Arabidopsis thaliana 0 988 100 100 0 (0) _
AT1G72560.5 11 Arabidopsis thaliana 0 988 100 100 0 (0) _
AT1G72560.4 11 Arabidopsis thaliana 0 988 100 100 0 (0) _
Os07g42180.1 7 Oryza sativa 0 1000 51 70 12 (12) _
Zm00001eb327340_P002 agpv5 Zea mays 0 1000 50 70 0 (0) _
Zm00001eb327340_P001 agpv5 Zea mays 0 1000 50 70 0 (0) _
Zm00001eb109040_P004 agpv5 Zea mays 0 1000 50 70 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Clathrin(1) DUF3385(4) HEAT(2) IBN_N(3) Xpo1(1) zf-C3HC4_5(1)
TargetP:	Cytoplasm (Class 3 C0.046; M0.038; S0.301; _0.872)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	988 aa (-cTP 921)
Molecular Weight	111.46 kDA(-cTP )
PI	5.44(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2288	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2301	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data