PPDB

The Plant Proteome Database

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AT1G72560.1   ARM repeat superfamily protein

Lab Annot. karyopherin
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G72560.6 11Arabidopsis thaliana09881001000 (0)_
AT1G72560.5 11Arabidopsis thaliana09881001000 (0)_
AT1G72560.4 11Arabidopsis thaliana09881001000 (0)_
Os07g42180.1 7Oryza sativa01000517012 (12)_
Zm00001eb327340_P002 agpv5Zea mays0100050700 (0)_
Zm00001eb327340_P001 agpv5Zea mays0100050700 (0)_
Zm00001eb109040_P004 agpv5Zea mays0100050700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Clathrin(1) DUF3385(4) HEAT(2) IBN_N(3) Xpo1(1) zf-C3HC4_5(1)
TargetP: Cytoplasm (Class 3 C0.046; M0.038; S0.301; _0.872)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 988 aa (-cTP 921)
Molecular Weight 111.46 kDA(-cTP )
PI 5.44(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2288Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2301Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help