PPDB

PPDB	The Plant Proteome Database

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AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein

Lab Annot.

lipoxygenase (PG in dbl mutant)
Mapman: 17.7.1.2 hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G17420.1 11 Arabidopsis thaliana 0 927 83 91 13 (13) C
AT1G67560.1 11 Arabidopsis thaliana 0 920 50 67 8 (6) C
AT3G45140.1 11 Arabidopsis thaliana 0 860 45 64 2030 (1447) C
Os03g08220.1 7 Oryza sativa 0 879 65 78 0 (0) M
Os02g10120.1 7 Oryza sativa 0 841 46 66 26 (26) C
Os04g37430.1 7 Oryza sativa 0 575 62 77 3 (3) C
Zm00001eb005920_P001 agpv5 Zea mays 0 876 65 79 0 (0) M
GRMZM2G017616_P01 3.21 Zea mays 0 876 65 79 4 (4) M
v1_GRMZM2G017616_P01 4a53 Zea mays 0 876 65 79 4 (4) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3046(1) Imm49(1) Lipoxygenase(1) PLAT(1)
TargetP:	Chloroplast (Class 1 C0.938; M0.049; S0.006; _0.072)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	926 aa (-cTP 868)
Molecular Weight	104.81 kDA(-cTP 98.30)
PI	7.09(-cTP 6.37)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
655	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
871	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
872	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type (1-8); k2k3 (9-10)
1125	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1126	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1127	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1446	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 2)
1613	Detail								Natural Senescence leaf [A. thaliana]
1614	Detail								Natural Senescence leaf [A. thaliana]
1618	Detail								[A. thaliana]		m48
1619	Detail								[A. thaliana]		m48
1621	Detail								[A. thaliana]		m48
1622	Detail								[A. thaliana]		m48

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data