PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G72520.1   PLAT/LH2 domain-containing lipoxygenase family protein
Lab Annot. lipoxygenase (PG in dbl mutant)
Mapman: 17.7.1.2 hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G17420.1 11Arabidopsis thaliana0927839113 (13)C
AT1G67560.1 11Arabidopsis thaliana092050678 (6)C
AT3G45140.1 11Arabidopsis thaliana086045641888 (1541)C
Os03g08220.1 7Oryza sativa087965780 (0)M
Os02g10120.1 7Oryza sativa0841466626 (26)C
Os04g37430.1 7Oryza sativa057562773 (3)C
Zm00001eb005920_P001 agpv5Zea mays087665790 (0)M
GRMZM2G017616_P01 3.21Zea mays087665794 (4)M
v1_GRMZM2G017616_P01 4a53Zea mays087665794 (4)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF3046(1) Imm49(1) Lipoxygenase(1) PLAT(1)
TargetP: Chloroplast (Class 1 C0.938; M0.049; S0.006; _0.072)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 926 aa (-cTP 868)
Molecular Weight 104.81 kDA(-cTP 98.30)
PI 7.09(-cTP 6.37)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
655Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
871Detail       leaf [A. thaliana] chloroplast stromawild-type
872Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (1-8); k2k3 (9-10)
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1127Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1613Detail       Natural Senescence leaf [A. thaliana]  
1614Detail       Natural Senescence leaf [A. thaliana]  
1618Detail        [A. thaliana] m48
1619Detail        [A. thaliana] m48
1621Detail        [A. thaliana] m48
1622Detail        [A. thaliana] m48

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help