PPDB

The Plant Proteome Database

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AT1G72440.1   CCAAT-binding factor

Lab Annot. CCAAT-binding factor
Mapman: 27.3.13 RNA.regulation of transcription.CCAAT box binding factor family, DR1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os09g02810.1 7Oryza sativa0107047622 (2)_
Zm00001eb008900_P001 agpv5Zea mays0105650640 (0)_
Zm00001eb008900_P003 agpv5Zea mays0105650640 (0)_
Zm00001eb008900_P002 agpv5Zea mays062556710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_22(1) CBF(1) Cnd1(2)
TargetP: Secreted (Class 4 C0.306; M0.041; S0.591; _0.104)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1043 aa (-cTP 996)
Molecular Weight 117.02 kDA(-cTP )
PI 5.09(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help